Results for "Comparative genomics"
Top-level pages
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Binding Site Prediction in Proteins tools CASTp : http://sts.bioengr.uic.edu/cast...into a correlation vector. We show that this shape descriptor is suited for comparat...3748 days ago
Perl one-liner for bioinformatician !!!
With the emergence of NGS technologies, and seq...d wrangle around massive amounts of genomics text. There are several "stan...regexp. Reference/Sources: http://genomics-array.blogspot.in/2010/11/som...-for-your-gene-annotations/ http://genomics-array.blogspot.com/2010/11/so...3632 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them...r BiocViews HT-Seq Data Visualization ggbio: ggplot2 extension for genomics data (online manual) Gviz:&nb...3628 days ago
Commercial and public next-gen-seq (NGS) software
...interactive and reproducible genomics. A job webportal. Genomatix -...Sequencing data analysis. JMP Genomics - Next gen visualization and...is Ruiqiang Li at the Beijing Genomics Institute. C++, POSIX. SSAHA...' read Extension (SSAKE) is a genomics application for aggressively...3523 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that all...chers and academics. Visit http://voyager.completegenomics.com to signup. More @ ...rst application to create a music melody from DTC-Genomics data. If you own 23andMe (Mou...3545 days ago
- Pathway Analysis is usually performed with aim to enrich the genes with their functional...to disclose the relationships between these genes. With availability of more genomics, transcriptomics and proteomi...
3500 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
DEPARTMENT OF BIOTECHNOLOGY Centre For DNA Fingerprinting And Diagnostics (CDFD), Hyd...- Indian Institute of Chemical Technology, Hyderabad IGIB - (Institute of genomics and Integrative Biology) IM...2574 days ago
Software packages for next gen sequence analysis
...interactive and reproducible genomics. A job webportal. * Genomatix...quencing data analysis. * JMP Genomics - Next gen visualization and...is Ruiqiang Li at the Beijing Genomics Institute. C++, POSIX. * SSAH...' read Extension (SSAKE) is a genomics application for aggressively...3246 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...SC variant database, complete genomics master var file Read mapping...TCGA databases Lasergene Genomics Suite Comprehensive NGS so...oftware product, for clinical genomics professionals, manage, curate...lso be imported from Complete Genomics (cg_process_sample command),...2912 days ago
- alignment: the mapping of a raw sequence read to a location w...dled with SAMtools, for identifying and filtering genomics variants. bowtie: widely use...command line tools for identifying and filtering genomics variants. Created by Heng Li,...
2873 days ago
