3945 days ago
List of In-silico Binding Site Prediction Tools
...lar sites on protein surfaces by local surface structure alignment. It compares the query protein to members...ved, when the method was tested against a data-set of apo-proteins and compared with their respective ligand...3741 days ago
Next generation sequencing in R or bioconductor environment
...ShortRead, Rsamtools, rtracklayer, GenomicFeatures and BSgenome. Compared to the IRanges container, th...de uses the test data set from the above BayesPeak package in order to compare the results from both methods...3622 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...nalysis. #1 in accuracy: fewer false negatives and better sensitivity compared to results obtained from oth...delimited file (.sft, .tsv) Genome Track Analyzer Description: compares genome tracks; allows user t...2906 days ago
Genome Assembly Tools and Software - PART1 !!
...ogether.2.Reducing/removing reference bias as compared to mapping based approaches....assemblies, although REF-EVAL can be used to compare sets of any kinds of genomic...semblies of superior contiguity and accuracy, compared with the assemblies generate...2683 days ago
Bioinformatics Web Application Development with Perl
...p;Rose::DB::Object builds on Rose::DB to provide an object-relational mapper for Perl. While its high level features most directly compare to those of DBIx::Class, it's...2319 days ago