2505 days ago
RNAcon: web-server for the prediction and classification of non-coding RNAs
RNAcon is a web-server for the prediction and classification of non-coding RNAs. It uses S...014) Prediction and classification of ncRNAs using structural informationBMC Genomics 2014, 15:1272498 days ago
CrocoBLAST: Optimized parallel implementation of local sequence alignment algorithms
Local sequence alignment is a cornerstone of bioinformatics, allowing to compare the amino-a...accuracy and general applicability of BLAST with computational efficiency, accessibility, an...an be analyzed efficiently even when only modest computat...2490 days ago
2484 days ago
Sequence - Evolution - Function; Computational Approaches in Comparative Genomics
...tion is an introduction to the computational approaches that play a critic...anch of biology known as functional genomics. The book provides the reader with...ciples and approaches of functional genomics and of the potential and limitations of computational and experimental approac...2478 days ago
CHSMiner: a GUI tool to identify chromosomal homologous segments
Background The identification of chromosomal homologous segments (CHS) within and between genomes is essential for comparative genomics. Various processes including...2373 days ago
Opera: An optimal genome scaffolding program
Opera (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.wikipedia.org/wiki/Sequence_assembly...imal genomic scaffolds with high-throughput paired-end sequences. Journal of Computat...2365 days ago
Computational Genomics: Applied Comparative Genomics
...mic analyses. We will study the leading computational and quantitative approaches f...uencing data. The course will focus on human genomics and human medical application...ll include genome assembly & comparative genomics, variant identification &...2363 days ago
2363 days ago
phyloXML: XML for evolutionary biology and comparative genomics
phyloXML (example) is an XML language designed to describe phylogenetic trees (or networks) and associated data. PhyloXML provides elements for commonly u...2363 days ago