Results for "Computational RNA Biology"
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Harvest is a suite of core-genome alignment and visualization tools for quickly ana...nment and visualization of thousands of intraspecific microbial genomes. Genome Biology, 15 (11), 1-15 [PDF]...2666 days ago
FSA: Fast Statistical Alignment
FSA is a probabilistic multiple sequence alignment algorithm which uses a "distan...roach to aligning homologous protein, RNA or DNA sequences. Much as dis...r small-scale analyses of proteins or RNAs to large-scale problems such...zed inference algorithm to reduce the computa...2660 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 201...NGS now supports large scale RNA- and small-RNA-Seq and Unique Molecular Iden...he first theme is large-scale RNA-Seq data analysis. Current cr...entifiers, or UMIs, for DNA-, RNA- and small-RNA-Seq. UMI suppo...2401 days ago
- A computational pipeline for identifying single-base substitutions between two closely related genomes without the help of a reference genome. DIAL works even when the...
2637 days ago
Pacbio Long Reads Compatible Software and Tools
The following software packages are known to be compatible with PacBio® data, in addition to PacBio's own SMR...Variations Detection Reference-based alignment Consensus and variant calling RNA ana...2622 days ago
- ...gies are being applied to a wide range of important topics in biology. However, the analyses of non-model...course addresses the specific strengths and weaknesses of alternative HTS technologies, the computational resources needed for HT...
2602 days ago
- NGS data are just a bunch of sequences, you have no idea which region in the genome each sequences comes from, wh...ie for DNA-Seq data and Tophat, STAR or HISAT for RNA-Seq...
2575 days ago
ERGO 2.0 Bioinformatics suites
ERGO 2.0 provides a systems biology informatics toolkit centered on comparative genomics to capture, query, and visualize sequenced genomes. Using Igenbio's proprietary algorit...2561 days ago
- The process of finishing a genome and moving it from a draft stage (the result...ge genome centers. The work in our lab has focussed on com...nomes (and near-complete ones) with surprisingly little computa...
2556 days ago
Grinder / Biogrinder - A versatile omics shotgun and amplicon sequencing read simulator
Grinder is a versatile program to create random shotgun and amplicon sequence libraries based on DNA, RNA or proteic reference sequence...Grinder may also be used to help decide between alternative...2553 days ago
