CISA: Contig Integrator for Sequence Assembly
A plethora of algorithmic assemblers have been proposed for the de novo assembly of genomes...the state-of-the-art assemblers and the hybrid assemblies merged by existing tools. This tool is implemented in...2708 days ago
Understanding Greedy Algorithms
Learning greedy algo for biologist. https://www.topcoder.com/community/data-science/data-science-tutorials/greedy-...ce/super_biokdd.pdf https://ocw.mit.edu/courses/biology/7-91j-foundations-of-compu...2711 days ago
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e-RGA: enhanced Reference Guided Assembly of Complex Genomes
Next Generation Sequencing has totally changed genomics: we are able to produce huge amount...ficult, de novo assembly being on top of this list. Despite efforts to design tools able to assemble, de novo, an...2704 days ago
MeGAMerge: A tool to merge assembled contigs, long reads from metagenomic sequencing runs
MeGAMerge MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequen...written to run on Linux. Requirements: You will need to have the following tools installed and in $PATH, or ad...2703 days ago
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Finding Patterns in Biological Sequences
In this report we provide an overview of known techniques for discovery of patterns of biol...biological verification of such patterns. Finally we list publicly available tools and databases for pattern dis...2700 days ago
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