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Results for "Core"

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• • Jit@jit.aber

  

  Many-Core Engine (MCE) for Perl example

  MCE spawns a pool of workers and therefore does not fork a new process per each element of data. Instead, MCE follows a bank queuing model. Imagine the line being the data and bank-tellers the parallel workers. MCE enhances that model by adding the ability to chunk the next n elements from the in...

  Tags: Bioinformatics, Programming, Perl, MCE, Parallel, Core, Thread, Fork

  2645 days ago

• • Jit@jit.aber

  

  Perl script to run in parallel https://perlmaven.com/speed-up-calculation-by-running-in-parallel #Perl #Parallel #Script #Core #Thread

  Tags: Perl, Parallel, Script, Core, Thread

  1610 days ago

• • Jit@jit.aber

  

  Core services: Reward bioinformaticians https://www.nature.com/news/core-services-reward-bioinformaticians-1.17251 #Service #Core #Reward #Bioinformatician

  Tags: Service, Core, Reward, Bioinformatician

  1554 days ago

• • Neelam Jha@neelam

  

  Snippy: Rapid haploid variant calling and core SNP phylogeny

  Snippy finds SNPs between a haploid reference genome and your NGS sequence reads. It will find both substitutions (snps) and insertions/deletions (indels). It will use as many CPUs as you can give it on a single computer (tested to 64 cores). It is designed with speed in mind, and produces a cons...

  Tags: Snippy, Rapid, haploid, variant, calling, core, SNP, phylogeny, bacteria

  2019 days ago