Results for "DNA Codes"
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EXCAVATOR2 is a collection of bash, R and Fortran scripts and codes that analyses Whole Exome Sequencing (WES) data to identify CNVs. EXCAVATOR2 enhances the identification of all genomic CNVs, both...2712 days ago
- SGA is a de novo genome assembler based on the concept of string graphs. The major goal of SGA is to be very memory efficient, which is achieved by using a compressed representation of DNA s...
2704 days ago
- The automated reconstruction of genome sequences in ancient genome analysis is a multifaceted process. EAGER enc...art tools for each step as well as new complementary tools tailored for ancient DNA d...
2701 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indica.... Use sequence quality data properly. Compare DNA t...
2693 days ago
Finding Patterns in Biological Sequences
In this report we provide an overview of known techniques for discovery of patterns of biological sequences (DNA a...2690 days ago
- Motif based sequence analysis suits The MEME Suite allows the biologist to discover novel motifs in collec...of other motif-based analyses. The MEME Suite supports motif-based analysis of DNA,...
2689 days ago
- PANDASEQ assembles paired-end Illumina reads into sequences, trying to correct for errors and uncalled bases. The...probability of the forward and reverse reads having come from a single piece of DNA.3...
2658 days ago
FSA: Fast Statistical Alignment
FSA is a probabilistic multiple sequence alignment algorithm which uses a "distance-based" approach to aligning homologous protein, RNA or DNA s...2644 days ago
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
DnaSP is a software package for a comprehensive analysis of DNA polymorphism data. Version 5 implements a number of new features and analytical methods allowing extensive DNA p...2644 days ago
- GenomeComp is a tool for summarizing, parsing and visualizing the genome wide sequence comparison results derived...other sequence features like repeat sequence distributions in one whole-genome DNA s...
2633 days ago
