Results for "DNA Repair"
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Fermi is a de novo assembler with a particular focus on assembling Illumina short sequence reads from a mamm...n raw reads.Fermi follows the overlap-layout-consensus paradigm and uses the FM-DNA-in...2799 days ago
- DECIPHER is a software toolset that can be used to maintain, analyze, and decipher large amounts of DNA se...
2778 days ago
- Murasaki is an anchor alignment program that is exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 35 wall minutes), or 8 mammals in 21 CPU...
2778 days ago
- Development of cancer is driven by somatic alterations, including numerical and structural chromosomal aberration...osomal CNA-associated breaks by a genome-wide approach, which can be applied to DNA co...
2158 days ago
- Metagenomics sequencing projects collect samples of DNA from uncharacterized environments that may contain hundreds or even thous...ta which uses interpolated Markov models (IMMs) to taxonomically classify DNA se...
2768 days ago
- HybPiper was designed for targeted sequence capture, in which DNA sequencing libraries are enriched for gene regions of interest, especia...rmatics tools in order to extract target sequences from high-throughput DNA se...
2743 days ago
- SGA is a de novo genome assembler based on the concept of string graphs. The major goal of SGA is to be very memory efficient, which is achieved by using a compressed representation of DNA se...
2709 days ago
- The automated reconstruction of genome sequences in ancient genome analysis is a multifaceted process. EAGER enc...art tools for each step as well as new complementary tools tailored for ancient DNA da...
2707 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indica.... Use sequence quality data properly. Compare DNA to...
2698 days ago
Finding Patterns in Biological Sequences
In this report we provide an overview of known techniques for discovery of patterns of biological sequences (DNA an...2695 days ago
