Results for "DNA test"
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PAired-eND Assembler for DNA sequences
PANDASEQ is a program to align Illumina reads, optionally with PCR primers embedded in the sequence, and reconstruct an overlapping sequence. More at https://github.com/neufeld/pandaseq2963 days ago
- MIRA is a multi-pass DNA sequence data assembler/mapper for whole genome and EST/RNASeq projects. MIRA assembles/maps reads gained by electrophoresis sequencing...
2963 days ago
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
PEAR is an ultrafast, memory-efficient and highly accurate pair-end read merge...ing the target fragment size as input. In addition, it implements a statistical test for minimizing false-positive...2962 days ago
Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
Smash is a completely alignment-free method/tool to find and visualise genomic rearrangements. The detection is based on conditional exclusive compression, namely...2942 days ago
YASS :: genomic similarity search tool
YASS is a genomic similarity search tool, for nucleic (DNA/RNA) sequences in fasta or plain text format (it...the heuristic pairwise local alignment tools for DNA sequences (FASTA, BLAST, PATT...able to search more fuzzy repeats, as non-coding DNA/...2937 days ago
- methylKit is an R package for DNA methylation analysis and annotation from high-throughput bisulfite sequencing. The package is designed to deal with sequencing data f...
2905 days ago
- Blobsplorer is a tool for interactive visualization of assembled DNA sequence data ("contigs") derived from (often unintentionally) mixed-species pools. It allows the simultaneous disp...
2894 days ago
- DarkHorse is a bioinformatic method for rapid, automated identification and ra...ally transferred proteins, but can also serve as an independent quality control test for potential horizontal tran...
2886 days ago
- _A5-miseq_ is a pipeline for assembling DNA sequence data generated on the Illumina sequencing platform. This README will take you through the steps necessary for running _...
2829 days ago
- Recent studies of the human genome have indicated that regulatory elements (e.g. promoters and enhancers) at dist...t gene expression levels. Genomic technologies for mapping interactions between DNA...
2881 days ago
