Results for "DNA test"
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
...tect and characterize protein-DNA interactions. Furey, Nat Rev...Two-stage Poisson model for testing RNA-seq data. Auer and Do...iant identification in pooled DNA using R. Altmann et al., Bioin...tions Tool - A web service to test for over-representation of sp...3791 days ago
List of bioinformatics open source projects/software.
Open source software is software that can be freely used, changed, and shared (in modified or unmodified form) by...GENtle An equivalent to the proprietary Vector NTI, a tool to analyze and edit DNA...3768 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...chitecture Model Emulator for Testing and Evaluating Software:...at simulates highly divergent DNA sequences and protein superfam...ate estimators or statistical tests, and generally to aid in the...program for the simulation of DNA sequence evolution across a ph...3749 days ago
List of In-silico Binding Site Prediction Tools
...rvers and manual prediction groups tested at both CASP8 and CASP9.RE...manual prediction groups that were tested at CASP8. The FunFOLD metho...ash;small ligand and protein–DNA binding sites. Availability: T...to extract pocket descriptors and test own scoring functions respect...3755 days ago
Next generation sequencing in R or bioconductor environment
...lling package for identifying DNA binding sites of proteins in...ollowing sample code uses the test data set from the above Baye...strings, BSgenome, GO.db, multtest and stat packages. Documentat...TopHat SpliceMap SplitSeek DNA-Methylation Data Analysis...3636 days ago
Commercial and public next-gen-seq (NGS) software
...flows for: ChIP-Seq, RNA-Seq, DNA-Seq, DNA Methylation, Gene Expression,...finding near exact matches in DNA or protein databases using a...he Arabidopsis Genome Reveals DNA Methylation Patterning" Nature...entre. JAVA/OS independent. Latest versions available as part of...3530 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is...r the opening and analysis of DNA sequencing files - ab1. It in...tps://itunes.apple.com/us/app/dnaapp/id854944694?mt=8 DNAApp:...r the opening and analysis of DNA sequencing files - ab1. It in.... YeastGenome contains the latest from the Saccharomyces Genome...3553 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
DEPARTMENT OF BIOTECHNOLOGY Centre For DNA Fingerprinting And Diagnostics (CDFD), Hyderabad ( Institu...ific Research, Bangalore • National Accreditation Board for Testing & Calibration Laborato...2582 days ago
Software packages for next gen sequence analysis
...finding near exact matches in DNA or protein databases using a...erfect 3'-most k-mers using a DNA prefix tree. Authors are Ren&...data. A partially implemented test version is available here * X...entre. JAVA/OS independent. Latest versions available as part of...3254 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...RADIA Description: RNA and DNA Integrated Analysis for Somati...ts somatic SNVs with multiple testing correction, uses Fisher&rs...signal, predicted algorithm, cDNA position and interpretation...plications including: carrier testing, or identification of caus...2920 days ago
