Results for "Data Structure"
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flo - same species annotations lift over pipeline Lift over is the process of transferring annotations from one...ign the new assembly with the old one (e.g., with BLAT), process the alignment data to d...3020 days ago
- Although centromeres are essential for life and are the subject of extensive research,...known centromere locations from high coverage Hi-C data of budding yeast and a human...tagenomic samples with relatively low coverage Hi-C data to i...
3018 days ago
- HiCdat: a fast and easy-to-use Hi-C data analysis tool HiCdat is easy-to-use and provides solutions starting from aligned reads up to in-depth analyses. Importantly, HiCda...
3018 days ago
- This is a collection of libraries and high-quality end-user scripts for...king with gene annotation, collecting data scores from a variety of mode...otation formats and the collection of data from multiple data files. The...ckage includes scripts for setting up databases...
3011 days ago
- Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, suc...
3005 days ago
Ensembl comparative genomics resources
...ble analysis of chordate genome data. Ensembl computes pairwise an...e a consistent informatics infrastructure and data presentation across all suppo...sembl comparative genomics infrastructure is extensively reused for the...o produce reference comparative data and make it freely available. Dat...3001 days ago
- This software is designed to identify both simple and complex rearrangements from paired-end sequencing data. Use...
3000 days ago
- Machine Learning in Python Simple and efficient tools for data mining and data analysis Accessible to everybody, and reusable in various contexts Built on NumPy, SciPy, and matplotlib Open source, commercially usable - BSD license More at http://scikit-learn.org/stable/index.html
3000 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a gen...e Indicate the reliability of each aligned column. Use sequence quality data prop...
2991 days ago
