Public Databases for Bioinformatics !
...://www.encodeproject.org/files/ENCFF177HHM/@@download/ENCFF177HHM.bam as we as the GENCODE annotation v29 from ftp://ftp.ebi.ac.uk/pub/databases/gencode/Gencode_human/release...1134 days ago
7th International Conference on Bioinformatics and Computational Biology (BICoB)
...pproaches to molecular biology, multiscale modeling, pathways,gene networks. Computational Proteomics: Filtering and indexing sequence databases, Peptide quantification and i...3494 days ago
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GeneValidator - Identify problems with predicted genes
GeneValidator helps in identifing problems with gene predictions and provide useful information extracted from analysing orthologs in BLAST databases. The results produced can be used...2804 days ago
Entrez Direct: E-utilities on the UNIX Command Line
Entrez Direct (EDirect) is an advanced method for accessing the NCBI's suite of interconnected databases (publication, sequence, structure, gene, variation, expression, etc.) from a UN...2750 days ago
Finding Patterns in Biological Sequences
...s). We also provide biological motivation, and methods of biological verification of such patterns. Finally we list publicly available tools and databases for pattern discovery. On-lin...2686 days ago
2621 days ago
SeqMule: Automated human exome/genome variants detection
...ons, such as pooling consensus calls from various callers, plotting a Venn diagram showing intersection among different callers, and downloading databases. SeqMule can be used for both...2611 days ago
NCBI Prokaryotic Genome Annotation Pipeline
...tailed description of the new version of the pipeline in NCBI Handbook chapter. NCBI's annotation pipeline depends on several internal databases and is not currently availabl...2541 days ago