Results for "Deployment Tool"
Bookmarks
Bioinformatics is developing very rapidly. With new tools and software it is, now a days, easy to analyse the large scale g...ics datasets. But we need to understand the background of software/tool to better explain the data co...3945 days ago
DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
DAVI consists of models for both global and local alignment an...rformance of DAVI against existing state-of-the-art tool sets and found that its accuracy and performance is comparable to existing tools used for bench-marking. We f...1147 days ago
- Cava Packager allows packaging of applications written in Perl. Packaged applications can be distributed without the need for an installation of Perl on the target mac...
3917 days ago
Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation
We demonstrate a novel approach forlocal alignment of DNA reads with respect to reference...ment , while achieving accuracy comparable to existingdefacto standard BWA-MEM tool. https://prakharg24.github....1147 days ago
Taverna Workflow Management System
Taverna is an open source domain independent Workflow Management System – a suite of tools used to design and execute s...flows). Taverna is also available as a Command Line Tool for a quick execution of work...3916 days ago
PLOS Computational Biology: Translational Bioinformatics educational resources
PLOS present collection of Education articles: “Translational Bioinformatics&...is presented as an online “book” which could serve as a reference tool for a graduate level introduc...3915 days ago
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell University pro...g data PubMed: 21478889 SNiPlay: a web-based tool for detection, management and...ttp://www.ncbi.nlm.nih.gov/pubmed/23657089 GATK: a Toolkit for Genome Analysis h...3488 days ago
Latest paper on comparison of mapping tools
A. Hatem, D. Bozdag, A. E. Toland, U. V. Catalyurek "Benchmarking short sequence mapping tools" BMC Bioinformatics, 14(1):1...rdjournals.org/content/28/24/3169 Some new Mapping tool links: GSNAP http://researc...3897 days ago
Bioinformatics software for biologists in the genomics era
The genome sequencing revolution is approaching a landmark fig...l paradigms under which biologist-friendly software tools are designed and developed t...r the current supposition that biologists should re-tool and become programmers when a...3787 days ago
- "By removing the time-consuming step of read mapping, the authors reported, Sailfish able to provide quantification estimates 20–30 times faster than current methods without loss of accuracy." Tool link: http://www.cs.cmu.edu/~ckingsf/software/sailfish/
3664 days ago
