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Taverna Workflow Management System
...ts. The Taverna suite is written in Java and includes the Taverna Engine(used for enacting workflows) that powers both the Taverna Workbench(the desktop client application) and the T...3908 days ago
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
...tive results. Together with a highly optimized implementation, it can merge millions of paired end reads within a couple of minutes on a standard desktop computer. More at http:...2943 days ago
GATB : Genome Analysis Toolbox with de-Bruijn graph
...provides a set of highly efficient algorithms to analyse NGS data sets. These methods enable the analysis of data sets of any size on multi-core desktop computers, including very hug...2921 days ago
- ...to graphics. For example, rendering interactive heatmaps from large input datasets (e.g., 100k+ rows) has been computationally infeasible on both desktop computers and web browsers. I...
2745 days ago
- Minia is a short-read assembler based on a de Bruijn graph, capable of assembling a human genome on a desktop computer in a day. The output of Minia is a set of contigs. Minia produce...
2697 days ago
- ...tive results. Together with a highly optimized implementation, it can merge millions of paired end reads within a couple of minutes on a standard desktop computer.
2686 days ago
- ...nt) is a program designed to align a pair of whole genomic sequences of not only bacteria but also entire chromosomes of vertebrates on a nominal desktop computer. Cgaln performs an a...
2621 days ago
- CLgenomics is a standalone desktop software specifically designed for bacterial genome analysis. This program has a powerful multi-genome browser, which enables rapid and responsive...
2612 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
...is efficient and can process large read data sets, included from eukaryotic or vertebrate species, on a usual computing server, and even works on desktop/laptop computers. It adopts...2574 days ago
PLAST: A fast, accurate and NGS scalable bank-to-bank sequence similarity search tool
...lution. It is easy to install, cost-effective, takes full advantage of multi-core processors and uses a small RAM footprint, Ready to be used on desktop computer, cluster, cloud as w...2339 days ago
