Rdatamining.com : R and Data Mining
This website presents examples, documents and resources on data mining with R. Documents on using R for data mining are available to download for non-commercial personal use, including...3914 days ago
Download mutliple fasta file from NCBI in one GO!!
if you have less time, then use three ways mentioned in bookmark link to extract/download all fasta sequences in single click given that you already have a list of GIs or accession IDs...3908 days ago
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Public Databases for Bioinformatics !
...OADMAP datasets https://www.encodeproject.org/files/ENCFF446WOD/@@download/ENCFF446WOD.bed.gz, https://www.encodeproject.org/files/ENCFF546PJU/@@download/ENCFF546PJU.bam, https:/...1137 days ago
Encode sequencing data freely available to download and use for academic means
In Encode, regulatory elements investigated via DNA hypersensitivity assays, assays of DNA methylation, and chromatin immunoprecipitation (ChIP) of proteins that in...3704 days ago
COSMOS, our workflow management system for NGS data
...hort-read "NGS" sequencing data is open-access published via Advance Access in Bioinformatics (Gafni et al. 2014). It is also available for download for non-commercial academic a...3572 days ago
UCSC Genome Browser and Blat software !
...tforms. To determine which set of binaries to download, type "uname -a" on the comma...nal use. A license is required for commercial download and installation of these bin...//www.kentinformatics.com). More at http://hgdownload.cse.ucsc.edu/admin/exe/2997 days ago
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RNA-Seq De novo Assembly Using Trinity
...seq/wiki ...................................................................................................................................... Download Trinity here. Build Trinity...2963 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
...1.2 Gb) is around two days on 24 CPUs. You can find the manual here. Download the latest source code from here. Stable versions can also be downloaded from the Broad Institute's...2912 days ago