Results for "Edit DNA"
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Pattern Searching in a Single Genome
Pattern searching holds much importance for biologists , for the understanding of DNA ( and its functionality) can...2984 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indica...olumn. Use sequence quality data properly. Compare DNA to proteins, with frameshifts...
2982 days ago
PAired-eND Assembler for DNA sequences
PANDASEQ is a program to align Illumina reads, optionally with PCR primers embedded in the sequence, and reconstruct an overlapping sequence. More at https://github.com/neufeld/pandaseq2954 days ago
- MIRA is a multi-pass DNA sequence data assembler/mapper for whole genome and EST/RNASeq projects. MIRA assembles/maps reads gained by electrophoresis sequencing (aka Sang...
2954 days ago
Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
Smash is a completely alignment-free method/tool to find and visualise genomic rearrangements. The detection is based on conditional exclusive compression, namel...2934 days ago
YASS :: genomic similarity search tool
YASS is a genomic similarity search tool, for nucleic (DNA/RNA) sequences in fasta or plain text forma...euristic pairwise local alignment tools for DNA sequences (FASTA, BLAST, PATT...to search more fuzzy repeats, as non-coding DNA/RNA. Another simple, but inte...2928 days ago
- methylKit is an R package for DNA methylation analysis and annotation from high-throughput bisulfite sequencing. The package is designed to deal with sequencing data from RRBS and i...
2896 days ago
- Blobsplorer is a tool for interactive visualization of assembled DNA sequence data ("contigs") derived from (ofte...
2885 days ago
- _A5-miseq_ is a pipeline for assembling DNA sequence data generated on the Illumina sequencing platform. This README will take you through the steps necessary for running _A5-miseq_. P...
2820 days ago
- Recent studies of the human genome have indicated that regulatory elements (e.g. pro...t gene expression levels. Genomic technologies for mapping interactions between DNA regions, e.g., ChIA-PET and H...
2872 days ago
