BOL: Results for "Estimate"

Results for "Estimate"

- Abhimanyu Singh@abhimanyu
Comment on "Estimate Genome Size"
...nd identify the approximate peak # use find_valleys.pl to help pinpoint the actual peak find_valleys.pl fastq.counts_0.histo # estimate the size and coverage estimate_genome_size.pl --kmer=31 --pe...
1899 days ago
- Rahul Nayak@rahul
Comment on "CANU: Assembling Large Genomes with Single-Molecule Sequencing and Locality Sensitive Hashing."
...in the same directory. The genome size should be your best guess of the haploid genome size of what is being assembled. It is used primarily to estimate coverage in reads, NOT as the...
2100 days ago
- Poonam Mahapatra@poonam
Comment on "CANU: Assembling Large Genomes with Single-Molecule Sequencing and Locality Sensitive Hashing."
...l_b/public_data/minion_brown_metagenome/brown_metagenome.2D.10.fasta This puts output in directory meta with prefix “meta”. We estimate the genome size, tell canu NO...
2176 days ago
- Rahul Nayak@rahul
Comment on "Bio++ : C Language libraries for your biological need"
...Molecular Evolution.Bio++ Suite contains the following components:bppPars (Optimize a phylogenetic tree according to maximum parsimony).bppDist (Estimate a distance matrix and build a...
3827 days ago