SeqMule: Automated human exome/genome variants detection
SeqMule takes single-end or paird-end FASTQ or BAM files...the parameters by modifying its configuration file. SeqMule also has some built-in fu...among different callers, and downloading databases. SeqMule can be used for both Mend...2609 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of various histone modif...2566 days ago
2553 days ago
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
GraphMap - A highly sensitive and accurate mapper for long...precision across different error profiles, rates and sequencing technologies even with...ment of a new spliced-alignment mode for mapping RNA-seq reads is under way.Descriptio...2517 days ago
2499 days ago
GeneProf: analysis of high-throughput sequencing experiment
GeneProf is a web-based, graphical software suite tha...to analyse data produced using high-throughput sequencing platforms (RNA-seq and ChIP-seq; "Next-Generatio...s'). Integrated Analysis:Analysis of ChIP-seq and RNA-seq da...2489 days ago
INC-Seq: accurate single molecule reads using nanopore sequencing
INC-Seq reads enabled accurate species-level classification, identification of species at 0.1 % abundance and robust quantification of relative abundances, providing a cheap and effective approach for pathogen detection and microbiome profiling on the MinION system.2344 days ago
2342 days ago
SVfinder: Tool for detecting genomic rearrangement form DNA-seq data
SVfinder provides genome-wide detection of structural variants from next generation paired-end sequencing reads.2327 days ago
2315 days ago