Results for "Features"
Bio-Scripts
Plot custom gene density with R
library(karyoploteR) pp2247 days ago
- ...ompiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working...
2096 days ago
Install and set up i-adhore for synteny and wgd analysis ! -- step by step --
...BI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX comp...1201 days ago
- #You typically need the corresponding genome sequence file in FASTA format. The GFF file contains information about the #features (such as genes) in the genome, including their locatio...
92 days ago
Perl and BioPerl script to extract protein sequences using GFF file !
#!/usr/bin/perl use strict; use warnings; use Bio::DB::Fasta; use Bio::SeqIO; # Paths to your GFF file and genome FASTA file my $gff_file = 'path/to/your/file.gf...92 days ago
Python script to parse GFF file
def parse_gff(gff_file): features = [] with open(gff_file, 'r') as f:...lit(';')) } features.append(feature) return f...age example gff_file = 'example.gff' parsed_features = parse_gff(gff_file) for fe...36 days ago
