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Bioinformatics approach to Boar Taint
...average coverage. Short reads generated from these samples mapped to Sus Scrofa version 10.2 reference assembly using Bowtie2. Alignment file then used for calling SNPs an...3788 days ago
Detect the sequence pattern and its location in fasta file with match and mismatches information.
This script is one of my old script to detect some centromeric pattern in chromosomes. User can also control the number of mismatches allowed through command line .. To run: perl centro.pl3866 days ago
- Mostly FASTA file contain NNN characters, which can be replace by random A T G C character with this perl script. It also print the FASTA sequence name, N's counts, nucleotide count and percentage details at command prompt/standard output.
3865 days ago
- ...the following error: fail to open file './temporarySam' [bwa_aln_co...E::hts_open_format] Failed to open file temporarySamsamtools sort: ca...ge.pl line 93.readline() on closed filehandle FILE at bin/OPERA-long-...pairedEdges_no_repeat_i3Analyzing file: pairedEdges_no_repeat_i4Anal...
2150 days ago
- SSPACE_longread complain for getopts.pl file. To resolve this, download and have in SSPACED-Longreads folder. Cheers :)
2150 days ago
Biotechnology Eligibility Test (BET) Question Paper !
...ewhere in the month of April. Official Notification for DBT-BET 2020 will be released in Feb 2020. Answer at https://bioinformaticsonline.com/file/view/39262/biotechnology-elig...1844 days ago
Biotechnology Eligibility Test (BET) Answer set !
...here in the month of April. Official Notification for DBT-BET 2020 will be released in Feb 2020. Question at https://bioinformaticsonline.com/file/view/39260/biotechnology-elig...1844 days ago
Sample bandage input file for visual analysis
Sample bandage input file for visual analysis ...1214 days ago
