R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This allows us to draw informative summary plots for analyses such as differential expression or clustering, where for each gene list we display its behaviour in the...Tags: R, GO, Gene Enrichments, Clustering, GO annotation, CRAN
3937 days ago
List of gene ontology software and tools
The Gene Ontology (GO) is a set of associations from biological phrases to specific genes that are either chosen by trained curators or generated automatically. GO is designed to rigorously encapsulate the known relationships between biological terms and and all genes that are instances of these ...Tags: GO, Gene, Ontology, Gene Ontology, Enrichments, Pathway, Annotation
3707 days ago
Tags: Bioinformatics, Cytoscape, Software, Platform, Visualization, Networks, GO
2902 days ago
Tags: Bioinformatics, ClueGO, GO, Cytoscope, Pie
2891 days ago
Tags: Bioinformatics, Database, Conversions, BioDBnet, GO
2891 days ago
Tags: Bioinformatics, clusterProfiler, GO, R, Package, Omics, Genes, Cluster
2877 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Clustering based on Functional annotation GeneSCF serves as command line tool for clustering the list of genes given by the users based on functional annotation (Gene Ontology, KEGG, REACTOME and NCG 4.0). It requires gene list in the form of Entre...Tags: Functional annotation, real-time enrichment analysis, KEGG, GO, GeneOntology, REACTOME, cancer db
2869 days ago
Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this domain called Enrichr. Enrichr currently contains a large collection of diverse gene set libraries available for analysis and down...Tags: Bioinformatics, Analysis, Enrichment, Enrichr, Web, Server, GO, Pathway, Genes, BED, Ontologies, Drug, Cell, Disease
2563 days ago
Tags: WEGO, Web, Gene, Ontology, Annotation, Plot, tool, visualizing, plotting, GO, Gene, Ontology, annotation, results
1481 days ago