2822 days ago
2800 days ago
Prokka: tool for the rapid annotation of prokaryotic genomes
...ter, and scales well to 32 core SMP systems. It produces GFF3, GBK and SQN files that are ready for editing in Sequin and ultimately submitted to Genbank/DDJB/ENA.2620 days ago
Genome Annotation Transfer Utility (GATU)
...t was designed for use with viral genomes, GATU can also be used to help annotate larger genomes (ie. bacterial genomes). The output is saved in GenBank, XML, or EMBL file format.2536 days ago
2536 days ago
2508 days ago
funannotate: Eukaryotic Genome Annotation Pipeline
...able to accurately and easily annotate a genome for submission to NCBI GenBank. Existing tools (such as Maker) require significant manually editing to comply with GenBank submission rules, thus funann...2058 days ago
genoPlotR - plot gene and genome maps project!
...ntation of several segments of DNA Comparisons represented by areas between the segments (like Artemis, for example) Reads from common formats: Genbank, EMBL, blast, Mauve, and from...1974 days ago
MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization
...ly filter pair-end raw data (fastq files), assemble genome, search for mitogenome sequences from the genome assembly result, annotate mitogenome (genbank file as result), and mitogeno...1566 days ago
HS3D: Homo Sapiens Splice Sites Dataset
...ata set of Homo Sapiens Exon, Intron and Splice regions extracted from GenBank Rel.123. The aim of this data...oaches for gene identification and characterization. From the complete GenBank (Primate Sequences Division)...1426 days ago