DAGchainer: Computing Chains of Syntenic Genes in Complete Genomes
...ftware computes chains of syntenic genes found within complete genome...nput, DAGchainer accepts a list of gene pairs with sequence homology...r the distance between neighboring genes on each DNA molecule and the...mining colinear sets of homologous genes found within a single genome...2631 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...Annual Meeting of the American Society of Human Genetics today. Two major themes i...rand NGS v3.1 address recent challenges in next generation sequencing (NGS). The...; the t-SNE plot; profile and heat-map plots of gene-body coverage; and several ot...2384 days ago
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gbtools: Interactive Visualization of Metagenome Bins in R
...annotations, including taxonomic assignments from conserved marker genes or SSU rRNA genes, can be imported simultaneou...y-side. gbtools reports summary statistics of bins including marker gene completeness, and allows the...2594 days ago
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DeCoSTAR - Detection of Co-evolution
...h aims at reconstructing ancestral gene or genome organizations, in t...encies- between pairs of ancestral genes or gene domains.Ancestral ge...omains are deduced from reconciled gene trees in a context of birth,...ct the histories of domains inside genes, including gene fusion and f...2576 days ago
Metagenomics assembly workshop !!
...and binning. The Tutorial Data Set FastQC Quality Control Assembly Velvet Assembly MEGAHIT Assembly IDBA-UD Assembly Ray Assembly Gene Prediction Assembly Evaluati...2572 days ago
Enrichr: a comprehensive gene set enrichment analysis
...nt analysis is a popular method for analyzing gene sets generated by genome-wide experimen...rently contains a large collection of diverse gene set libraries available for a...contains 180 184 annotated gene sets from 102 gene set libraries. New features h...2563 days ago