Results for "Gene Ontology"
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The greengenes web application provides access to the 2011 version of the greengenes 16S rRNA gene sequence alignment for brows...ading. The data and tools presented by greengenes can assist the researcher in...s. If you are an ARB user, you can use greengenes to...2866 days ago
- Records in 4DGenome are compiled through comprehensive literature curation of experimentally-derived and computat...able in a standardized file format. Records can be queried by genomic regions, gene nam...
2862 days ago
- Bambus 2.0, the second generation Bambus scaffolder available as an open source package. While most other s...irectly use the output of MUMmer), physical mapping data, or information about gene syn...
2818 days ago
GeneValidator - Identify problems with predicted genes
GeneValidator helps in identifing problems with gene predictions and provide useful information extra...by biocurators and researchers who need accurate gene predictions. If you would li...alidator on a few sequences, see our online GeneVali...2808 days ago
- In this exercise, a previously annotated gene will be used to measure the accuracy of different gene finding approaches. GRAIL, GENSCAN, geneid, FGENESH, GenomeScan, GrailEXP and GENEWISE will be use...http://genome.crg.es/courses/Bioinformatics2003_genefind...
2808 days ago
Method in Comparative genomics !!
We present methods for the automatic determination of genome cor...rthologs for more than 90% of genes and intergenic regions acros...he large number of duplicated genes in the yeast genome. The rem...ntification of protein-coding genes based on their patterns of n...rely on previous knowledge of gene fun...2733 days ago
- Gene finding in eukaryotic genomes is notoriously difficult to automate. The task i...-art performance across a wide range of species. GeneMark-ET is a gene prediction tool that incorpor...the prediction step. Complementary strengths of GeneMark...
1950 days ago
BLAST Ring Image Generator (BRIG)
BRIG is a free cross-platform (Windows/Mac/Unix) application that can display circular comparisons betwee...graphs and annotations can be displayed. Using a user-defined set of genes as input, BRIG can display gene pre...2773 days ago
- Development of cancer is driven by somatic alterations, including numeri...iated chromosomal breaks and identify genes that appear non-randomly aff...oss (large) series of tumor samples. ‘GeneBreak’ is developed to systema...annotation approach for breakpoint-to-gene map...
2153 days ago
- The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysis of miRNA (or more generall short RNA) expression usi...lly adapted for the analysis of reads generated with the Illumina sequen...ifferent mappers, create differential gene (mi...
2769 days ago
