Results for "Genome Project"
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Tools to create plots showing N-statistics for genome assemblies More at https://github.com/dentearl/n50PlottingTools3017 days ago
- Convenient conversions between genome assemblie. The liftover package makes it easy to remap genomic coordinates to a different genome assembly. More at https://github.com/aaronwolen/liftover https://www.bioconductor.org/help/workflows/liftOver/
3017 days ago
- CrossMap is a program for convenient conversion of genome coordinates (or annotation files) between diffe...GFF/GTF, VCF. CrossMap is designed to liftover genome coordinates between assemblie...t a program for aligning sequences to reference genome....
3017 days ago
- Spines Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad In...lelized program for high-sensitivity, genome-wide synteny; Papaya, an all-...w.broadinstitute.org/science/programs/genome-...
3016 days ago
- flo - same species annotations lift over pipeline Lift over is the process of transferring annotations from one genome assembly to another. Usually...lift over is done because there is a new, improved genome...
3015 days ago
- NCBI Remap. This tool is conceptually similar to liftOver in that in manages conversions between a pair of genome assemblies but it uses differ...r NCBI Remap. More at http://www.ncbi.nlm.nih.gov/genome/...
3014 days ago
- Although centromeres are essential for life and are the subject of extensi...search, centromere locations in yeast genomes are difficult to infer, and...verse applications, including de novo genome assembly, deconvolution of me...of all centromeres in a single yeast genome...
3013 days ago
UCSC Genome Browser and Blat software !
This directory contains Genome Browser and Blat application binaries built for standalo...by running the binary with no arguments. The UCSC Genome Browser and Blat software are...lFor information about commercial licensing of the Genome...3007 days ago
- Generic Genome Browser Version 2: A Tutorial for Administrators This is an extensive tutorial to take you through...database (no relational database required!) Later we will show how to set up a genome...
3006 days ago
