Results for "Genome Sequence"
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List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3943 days ago
- ...he following fundamental topics in bioinformatics: assembling genomes, comparing DNA and protein sequences, predicting genes, finding...g gene expression, constructing evolutionary trees, analyzing genome rearrangements, and identifying...
3943 days ago
Should you get sequenced? Not all bad genes predict disease
“What we really don’t know yet is whether the predictive aspects of the genome are going to turn out to be beneficial or potentially harmful” “As we roll out genomic medic...3900 days ago
Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation
We demonstrate a novel approach forlocal alignment of DNA reads with respect to reference genome.For this process we have used Skip-gram model for creatingencoding(Nucl2Vec) and k-nearest neighbor fo...1144 days ago
What Junk DNA? It’s an Operating System
The report adds to growing experimental support for the idea that all that extra stuff in the human genes, once ref...functionless, space-filling material that happens to make up nearly 98% of the genome....3910 days ago
Download mutliple fasta file from NCBI in one GO!!
if you have less time, then use three ways mentioned in bookmark link to extract/download all fasta sequences in single click given that y...{$1}}$c?print:chomp;$i{$_}=1 if @ARGV' GIs.txt >sequence.fasta where GIs.txt contains...3908 days ago
Next Generation Sequencing (NGS) Tutorials
...r benefit. Understanding the basics of genome sequencing: Tutorial by Luke...mapping and SNP calling using Next Generation Sequence 10.1186/1471-216....nih.gov/pubmed/23657089 GATK: a Toolkit for Genome Analysis http://www.broadi...3485 days ago
Latest paper on comparison of mapping tools
A. Hatem, D. Bozdag, A. E. Toland, U. V. Catalyurek "Benchmarking short sequence mapping tools" BMC Bioinformatics, 1...3895 days ago
- What is the epigenome? What does the epigenome do? What makes up the epigenome? Is the epigenome inherited? What is imprinting? Can the epigenome change? What makes the epigenome change? How do changes in the epigenome contribute to cancer? How are researchers exploring the epigenome?
3862 days ago
RNA Sequencing Helps Identify Functional Variants from GWAS
For Alzheimer’s and other complex disorders, mining the genome for disease-associated variants is no longer the obstacle. The challenge nowadays is figuring out how the identified...3814 days ago
