Results for "Genome Size"
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These tutorials are written for hundreds of bioinformaticians trying to cope with large...in the world of sequencing. Merely five years back, genome sequencing of higher eukaryotes used to be very expensive endeavor. To get a geno...2812 days ago
- The Sybil software package provides a primarily web-based front-end to comparative genome datasets warehoused in a chado relational...ter Institute (JCVI) and the Institute for Genome Sciences (IGS) at the Univers...research projects that involve comparative geno...
2810 days ago
GAGE : Genome Assembly Gold-standard Evaluation
GAGE is an evaluation of the very latest large-scale genome assembly algorithms. We have organized this "ba...an attempt to produce a realistic assessment of genome assembly software in a rapidl...of GAGE have now been published in the journal Geno...2810 days ago
CGView - Circular Genome Viewer
GView is a Java package used to display and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications.... Users can interact with the genome using a powerful pan-and-zoom...e-write of CGView, a circular genome viewer written by Paul Stotha...2798 days ago
BLAST Ring Image Generator (BRIG)
BRIG is a free cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data. The applicatio...and read coverage can be displayed for draft geno...2787 days ago
- Murasaki is an anchor alignment program that is exteremely fast (17 CPU hours for whole Human x Mouse geno...
2787 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
A recombination map has been added for all multi-locus traits. The map positions (chromosomal) for neu...iple haploid or diploid pairs of incompatible loci can be spread throughout the geno...2786 days ago
- The accurate description and annotation of structural variants can be complex. This is due to the different re...ir positions. Furthermore, multiple rearrangements in a single area of the geno...
2786 days ago
- Development of cancer is driven by somatic alterations, including numerical and structur...aberrations (CNAs) of chromosomal segments in tumor genomes. However, there is lack of c...location of chromosomal CNA-associated breaks by a geno...
2167 days ago
- The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysis of...olexa-reads, map them flexibly to several reference genomes using one of four different...put is furthermore compatible with software such as geno...
2783 days ago
