Results for "Genome Size"
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Convenient conversions between genome assemblie. The liftover package makes it easy to remap genomic coordinates to a different genome assembly. More at https://github.com/aaronwolen/liftover https://www.bioconductor.org/help/workflows/liftOver/3008 days ago
- CrossMap is a program for convenient conversion of genome coordinates (or annotation files) between diffe...GFF/GTF, VCF. CrossMap is designed to liftover genome coordinates between assemblie...t a program for aligning sequences to reference geno...
3008 days ago
- Spines Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad In...lelized program for high-sensitivity, genome-wide synteny; Papaya, an all-...w.broadinstitute.org/science/programs/geno...
3008 days ago
- flo - same species annotations lift over pipeline Lift over is the process of transferring annotations from one genome assembly to another. Usually lift over is done because there is a new, improved geno...
3007 days ago
- NCBI Remap. This tool is conceptually similar to liftOver in that in manages conversions between a pair of genome assemblies but it uses differ...or NCBI Remap. More at http://www.ncbi.nlm.nih.gov/geno...
3006 days ago
- Although centromeres are essential for life and are the subject of extensi...search, centromere locations in yeast genomes are difficult to infer, and...verse applications, including de novo genome assembly, deconvolution of me...of all centromeres in a single yeast geno...
3005 days ago
UCSC Genome Browser and Blat software !
This directory contains Genome Browser and Blat application binaries built for standalon...d by running the binary with no arguments. The UCSC Genome Browser and Blat software are...mlFor information about commercial licensing of the Geno...2999 days ago
- Generic Genome Browser Version 2: A Tutorial for Administrators This is an extensive tuto...abase (no relational database required!) Later we will show how to set up a genome size database using the berkeleydb...
2998 days ago
Ensembl comparative genomics resources
The Ensembl comparative genomics resources are one such reference set that f...ive and reproducible analysis of chordate genome data. Ensembl computes pairwise and multiple whole-genome alignments from which large-s...ecies by other projects including Ensembl Geno...2988 days ago
