Results for "Genomic Medicine"
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quickmerge uses a simple concept to improve contiguity of genome assemblies based on long molecule sequences, often...rintuitive because illumina short reads are not typically considered to cover genomic...2700 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial...) to the Pseudomonas aeruginosa curated annotations. Metagenomic Version: Prodigal can run in metagenomic...2691 days ago
- MetaBAT, An Efficient Tool for Accurately Reconstructing Single Genomes from Complex Microbial Communities Grouping large genomic fragments assembled from shotgun metagenomic...
2624 days ago
- Cgaln (Coarse grained alignment) is a program designed to align a pair of whole genomic sequences of not only bacteria but also entire chromosomes of ver...cleotide level. The former "coarse-grained" alignment can explore genomic...
2636 days ago
GenomeRing: alignment visualization based on SuperGenome coordinates
The number of completely sequenced genomes is continuously rising, allowing for comparative analyses of genomic variation. Such analyses are...pproach, where relationships between genomic regions are indicated by arcs...sive interpretation of all important genomic...2670 days ago
- Our basic strategy in building homology maps is to use exons that are orthologous in mul...ost of the genomes), join neighboring (adjacent in genomic coordinates, in each genome)...cliques from each run are used to output the exact genomic...
2652 days ago
- BRIG is a free cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large...d sequence data. BRIG also accepts SAM-formatted read-mapping files enabling genomic...
2641 days ago
- GenomeComp is a tool for summarizing, parsing and visualizing the genome wide sequence comparison results derived f...cies or strains.It can be easily used to compare, parsing and visualize large genomic...
2640 days ago
- This sockeye software uses the Ensembl database project to import sequence and anno...t of Sockeye. By using the Java3D API to visualize genomic data in a 3D environment, we...ith a novel platform for visualizing and comparing genomic...
2640 days ago
- Collectively, the bedtools utilities are a swiss-army knife of tools for a wide-range of genomics analysis tasks. The most wid...nbsp;count, complement, and shuffle genomic...
2634 days ago
