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Results for "Genomic Medicine"

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• • Jit@jit.aber

  

  #GC-Profile: a web-based tool for #visualizing and analyzing the #variation of #GC content in #genomic sequences https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1538862/

  2633 days ago

• • Jit@jit.aber

  

  #Palindromes and genomic stress fractures http://www.sciencedirect.com/science/article/pii/S1568786406001558

  2642 days ago

• • Rahul Nayak@rahul

  

  Unmasking the lower case values in genome. $ perl -pe '/^[^>]/ and $_=uc' genomic.fna > genomic.unmasked.fna #Genome #Unmask #Perl #Oneliner

  2529 days ago

• • Rahul Nayak@rahul

  

  Convert masked genome to N letters. $ perl -pe '/^[^>]/ and $_=~ s/[a-z]/N/g' genomic.fna > genomic.N-masked.fna #Genome #Masked #N #Convert

  2529 days ago

• • Jit@jit.aber

  

  Example commands to remove lower-case masking: perl -pe '/^[^>]/ and $_=uc' genomic.fna > genomic.unmasked.fna

  2371 days ago

• • Rahul Agarwal@raag

  

  Nice Short Review-Disease Biomarkers for Precision Medicine: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5414969/ #Omics #Cancer #PrecisionMedice

  2319 days ago

• • Rahul Agarwal@raag

  

  http://premc.org/conferences/pemed-personalized-precision-medicine/ #Conference #diagnostics #bioinformatics #drug discovery #therapies #NGS #Paris

  2310 days ago

• • Jit@jit.aber

  

  Unmask lowercase. perl -pe '/^[^>]/ and $_=uc' genomic.fna > genomic.unmasked.fna #LowerCase #Unmask

  2133 days ago

• • Jit@jit.aber

  

  Replace lowercase to N. perl -pe '/^[^>]/ and $_=~ s/[a-z]/N/g' genomic.fna > genomic.N-masked.fna #Mask #Lowecase2N #LowerCase

  2133 days ago

• • Jit@jit.aber

  

  #Mappy provides a convenient #interface to #minimap2, a fast and accurate #C program to #align #genomic and transcribe nucleotide #sequences. https://pypi.org/project/mappy/

  2048 days ago

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