Results for "Genomics to biology"

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  • OPERA : Optimal Paired-End Read Assembler

    OPERA (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.wi...script describing the new features and algorithms is available at Genome Biology. We look forward to getting y...

    2790 days ago

  • CGView - Circular Genome Viewer

    GView is a Java package used to display and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications and websites, or...

    2780 days ago

  • Shinyheatmap

    Background: Transcriptomics, metabolomics, metagenomics, and other various next-generation sequencing (-omics...datasets. Visualizing such big data has posed technical challenges in biology, both in terms of available c...

    2748 days ago

  • PLINK2

    This is a comprehensive update to Shaun Purcell's PLINK command-line program, developed by Christopher Chang with support from the NIH-NIDDK's...

    2742 days ago

  • Graph Genome Suite

    Seven Bridges is the biomedical data analysis company accelerating breakthroughs in genomics research for cancer, drug development and precision medicine. We...bsp;Graph Genome Suite — the most advanced population genomic...

    2741 days ago

  • LINKS

    LINKS is a genomics application for scaffolding genome assemblies with long reads, such as those produced by Oxford Nanopore Technologies Ltd. It can be used to scaffol...

    2734 days ago

  • Spines

    Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad Institute....

    2710 days ago

  • Velvet tutorial

    The objective of this activity is to help you understand how to run Velvet in general, how to accurately estimate the insert size of a paired-end library thro...

    2699 days ago

  • Understanding Greedy Algorithms

    Learning greedy algo for biologist.  https://www.topcoder.com/commu...gdon/ps/conference/super_biokdd.pdf https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014/lecture-slides/MI...

    2696 days ago

  • MyPro: A seamless pipeline for automated prokaryotic genome assembly and annotation

    MyPro is an improved genomics software pipeline for prokaryotic genomes. MyPro is user-friendly and requires minimal programming skills. High-quality prokaryotic genome...

    2693 days ago