3940 days ago
3936 days ago
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
...explanationand implementation steps at http://dna.cs.byu.edu/bio465/Labs/hmm.shtml Source code with expla...dels-viterbi-algorithm-cpg-islands-in-vb6/ Fore detail understanding of HMM read this excellent tutorial...3819 days ago
Next generation sequencing in R or bioconductor environment
...BayesPeak is a peak calling package for identifying DNA binding sites of proteins in ChIP-Seq experiments. Its algorithm uses hidden Markov models (HMM) and Bayesian statistical met...3619 days ago
Genome Assembly Tools and Software - PART1 !!
...sing a graph structure combining both de Bruijn graphs and protein HMMs. The inclusion of HMM information guides the assemb...nds, or rapidly evolving viral populations, such as HIV-1. TruHmm – TRanscription Unit As...2680 days ago