SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes a...suma. Bioinformatics, 26(9), 1145-51. Tutorial at http://evomics.org/learning/genomics/satsuma/2920 days ago
CovCal: Coverage / Read Count Calculator
Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target depth of coverage (or vice versa). Instructions: set the read length/configurat...2172 days ago
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Comparative genomics educational material and papers bookmarks
Alignment of the porcine genome against seven other mammalian genomes (Supplementary Information) identified homologous synteny blocks (HSBs). Using porcine HSBs and str...2740 days ago
Method in Comparative genomics !!
We present methods for the automatic determination of genome correspondence. The algo...e function for novel motifs. Our results demonstrate the power of comparative genomics to further our understanding...2740 days ago
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MyPro: A seamless pipeline for automated prokaryotic genome assembly and annotation
MyPro is an improved genomics software pipeline for prokaryotic genomes. MyPro is user-friendly and requires minimal programming skills. High-quality prokaryotic genome assembly a...2704 days ago