Results for "High"
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CGView - Circular Genome Viewer
GView is a Java package used to display and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications and websites, or as a visualiza...2798 days ago
- ...sources as well as programming acumen. Since heatmaps are used to depict high-dimensional numerical data as...skills and knowledge have frequently been barriers-to-entry for creating highly customizable heatmaps. Resu...
2766 days ago
- ...d connect bioinformatics tools in order to extract target sequences from high-throughput DNA sequencing rea...ci simultaneously based on bait sequences. HybPiper pipeline starts with high-throughput sequencing reads (...
2752 days ago
- ...plication for scaffolding genome assemblies with long reads, such as those produced by Oxford Nanopore Technologies Ltd. It can be used to scaffold high-quality draft genome assembli...
2752 days ago
- ....), as well as specialized tool sets for various analyses. It also features three sequence alignment packages: Satsuma, a highly parallelized program for high-sensitivity, genome-wide synt...
2728 days ago
- Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads. Cutadapt helps with these trimmi...
2711 days ago
CISA: Contig Integrator for Sequence Assembly
...rder to generate the most optimal assembly. However, few efforts have been pursued to take advantage of multiple assemblies to yield an assembly of high accuracy. In this study, we e...2711 days ago
- caffMatch is a novel scaffolding tool based on Maximum-Weight Matching able to produce high-quality scaffolds from NGS data (reads and contigs). The tool is written in Python 2.7. It...
2712 days ago
MyPro: A seamless pipeline for automated prokaryotic genome assembly and annotation
...genomes. MyPro is user-friendly and requires minimal programming skills. High-quality prokaryotic genome as...rs and contig integration software. Produces more contiguous assemblies, higher N50 values and lower number...2711 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
...entire microbial genome in 30 seconds or less. Accuracy: Prodigal is a highly accurate gene finder. It co...falls under 5%. GC-Content Indifferent: Prodigal performs well even in high GC genomes, with over a 90% p...2697 days ago
