#Varscan is a java program designed to call variants in sequencing data. It was developed at the Genome Institute at Washington University and is hos...
#GATK is a toolkit developed by the broad institu...rimarily on variant discovery and genotyping. It is open source, hosted on github, and available under a BSD 3-claus...ch is a package, environment, and dependency management softwar...ment. We do this with the command conda env create, we also use...