Results for "INSTITUTE OF ADVANCED STUDY IN SCIENCE AND TECHNOLOGY"

Bio-Scripts

  • Download with Snakemake !

    # list sample names & download URLs. sample_links = {"ERR458493": "https://osf....e_links.keys() # download yeast rna-seq data from Schurch et al, 2016 study rule download_all: input: expand("rnase...

    1517 days ago

  • Install Varscan on Ubuntu / Linux !

    #Varscan is a java program designed to call variants in sequencing data. It was developed at the Genome Institute at Washington University and is hos...

    824 days ago

  • Install GATK 4 using conda !

    #GATK is a toolkit developed by the broad institu...rimarily on variant discovery and genotyping. It is open source, hosted on github, and available under a BSD 3-claus...ch is a package, environment, and dependency management softwar...ment. We do this with the command conda env create, we also use...

    812 days ago