Results for "Interactive"
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SynVisio: An Interactive Multiscale Synteny Visualization Tool for McScanX.
SynVisio lets you explore the results of McScanX a popular synteny and collinearity detection toolkit and generate publication ready images. SynVisio requires two files to run: The simplified gff file that was used as an input for a McScanX query. The collinearity fi...Tags: SynVisio, Interactive, Multiscale, Synteny, Visualization, Tool, McScanX
1432 days ago
Interactive Bioinformatics Resources !
Learn how to use bioinformatics tools right from your browser.Everything runs in a sandbox, so you can experiment all you want. More at sandbox.bioTags: sandbox, bio, learn, Interactive, online, bioinformatics
995 days ago
Bandage: interactive visualization of de novo genome assemblies
Bandage (a Bioinformatics Application for Navigating De novo Assembly Graphs Easily) is a tool for visualizing assembly graphs with connections. Users can zoom in to specific areas of the graph and interact with it by moving nodes, adding labels, changing colors and extracting sequ...Tags: Bandage, interactive, visualization, de novo, genome, assemblies
2341 days ago
AliTV—interactive visualization of whole genome comparisons
AliTV, which provides interactive visualization of whole genome alignments. AliTV reads multiple whole genome alignments or automatically generates alignments from the provided data. Optional feature annotations and phylo- genetic information are supported. The user-friendly, web-browser based an...Tags: AliTV, interactive, visualization, whole, genome, comparisons
2304 days ago
Dot, an interactive viewer for genome-genome comparison
Dot, an interactive dot plot viewer that allows genome scientists to visualize genome-genome alignments in order to evaluate new assemblies and perform exploratory comparative genomics. Dot supports the output of MUMmer’s nucmer aligner the most commonly used software method for alig...Tags: Dot, interactive, viewer, genome-genome, comparison
2300 days ago
- BioCircos.js is an open source interactive Javascript library which provides an easy way to interactive display biological data on the web. It implements a raster-based SVG visualization using the open source Javascript framework jquery.js. BioCircos.js is multiplatform a...
Tags: BioCircos.js, open, source, interactive, Javascript, library, interactive, display, biological, data, web
2295 days ago
Generate interactive codon usage plots
Generate interactive codon usage plots as used at ensembl.lepbase.org. The input file format can be generated from an Ensembl database using the export_json.pl script from the easy-import pipeline. live demoTags: Generate, interactive, codon, usage, plots
2255 days ago
Epiviz: an interactive visualization tool for functional genomics data.
Epiviz is an interactive visualization tool for functional genomics data. It supports genome navigation like other genome browsers, but allows multiple visualizations of data within genomic regions using scatterplots, heatmaps and other user-supplied visualizations. It also includes data from the...Tags: Epiviz, interactive, visualization, tool, functional, genomics, data
2124 days ago
Bokeh: An interactive visualization library that targets modern web browsers for presentation
Bokeh is an interactive visualization library that targets modern web browsers for presentation. Its goal is to provide elegant, concise construction of versatile graphics, and to extend this capability with high-performance interactivity over very large or streaming datasets. Bokeh can help anyo...Tags: Bokeh, interactive, visualization, library, targets, modern, web, browsers, presentation
2092 days ago
S-plot2: creates an interactive, two-dimensional heatmap of sequences
S-plot2 creates an interactive, two-dimensional heatmap capturing the similarities and dissimilarities in nucleotide usage between genomic sequences (partial or complete). In S-plot2, whole eukaryotic chromosomes and smaller prokaryotic genomes can be efficiently compared. The tool includes funct...Tags: S-plot2, interactive, two-dimensional, heatmap, capture, similarities, dissimilarities, nucleotide, genomic, sequences
2043 days ago
