Results for "Junk DNA"
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Fermi is a de novo assembler with a particular focus on assembling Illumina sho...n raw reads.Fermi follows the overlap-layout-consensus paradigm and uses the FM-DNA-index (FMD-index) as the...2795 days ago
- DECIPHER is a software toolset that can be used to maintain, analyze, and decipher large amounts of DNA sequence data. To install DEC...
2773 days ago
- Murasaki is an anchor alignment program that is exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 35 wall minutes), or 8 mammals in 21 C...
2773 days ago
- Development of cancer is driven by somatic alterations, including numerical and stru...osomal CNA-associated breaks by a genome-wide approach, which can be applied to DNA copy number data obtained by...
2153 days ago
- Metagenomics sequencing projects collect samples of DNA from uncharacterized environments that may contain hundreds or even...ch uses interpolated Markov models (IMMs) to taxonomically classify DNA sequences, can accurately cla...
2763 days ago
- HybPiper was designed for targeted sequence capture, in which DNA sequencing libraries are enriched for gene regions of interest,...tools in order to extract target sequences from high-throughput DNA sequencing reads. Targeted b...
2739 days ago
- SGA is a de novo genome assembler based on the concept of string graphs. The major g...ery memory efficient, which is achieved by using a compressed representation of DNA sequence reads. More at htt...
2705 days ago
- The automated reconstruction of genome sequences in ancient genome analysis is a mul...art tools for each step as well as new complementary tools tailored for ancient DNA data within a single integrat...
2702 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indica.... Use sequence quality data properly. Compare DNA to proteins, with frameshifts...
2693 days ago
Finding Patterns in Biological Sequences
In this report we provide an overview of known techniques for discovery of patterns of biological sequences (DNA and proteins). We also provid...2690 days ago
