2984 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
...(2010). Genome-wide synteny through highly sensitive sequence alignment: Satsuma. Bioinformatics, 26(9), 1145-51. Tutorial at http://evomics.org/learning/genomics/satsuma/2910 days ago
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Understanding Greedy Algorithms
Learning greedy algo for biologist. https://www.topcoder.com/community/data-sci...-tutorials/greedy-is-good/ This webpage is also useful for the same: http://learninglover.com/examples.php?id=59...2697 days ago
FSA: Fast Statistical Alignment
...novel methods for constructing better alignments: FSA uses machine-learning techniques to estimate gap an...eters on the fly for each set of input sequences. This "query-specific learning" alignment method makes FSA v...2641 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of various histone modifications to d...2569 days ago