List of generic simulation software/tools/resource with brief description and homepage !!!
...i.ac.uk/projects/bargen/kernalPop A spatially explicit population genetic simulation engine http://cran.r-project.org/src/contrib/archive/kernelpop/MaCS Markovian Coalescent Simulato...3739 days ago
Next generation sequencing in R or bioconductor environment
...ocumentation CSAR: Documentation ChIP-Seq Pipeline: PICS, rGADEM and MotIV (developer web site) SPP: ChIP-seq processing pipeline SPP Tutorial MACS SIPeS RNA-Seq Analysis Cou...3626 days ago
Commercial and public next-gen-seq (NGS) software
...th Genome Sciences Centre. JAVA/OS independent. Latest versions available as part of the Vancouver Short Read Analysis Package MACS - Model-based Analysis for ChIP-Seq. MACS empirically models the length...3520 days ago
Software packages for next gen sequence analysis
...Genome Sciences Centre. JAVA/OS independent. Latest versions available as part of the Vancouver Short Read Analysis Package * MACS - Model-based Analysis for ChIP-Seq. MACS empirically models the length...3244 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...res genome tracks; allows user to compare DNA expression/binding; Input: multiple: SGR/TXT, BED, BED6, GFF; if using prealigned sequence data- use MACS peak caller: BAM, BED, SAM, E...2910 days ago