Best book Titles for Learning Bionformatics
...Humana Press Bioinformatics: Databases and Systems, Stanley Letovsky (Editor),19...is, Joao C. Setabal, 1997, PWS Pub. Co. Algorithms on Strings, Trees, and Sequen...Weissman (Editor), 1999, Academic Press Systems Biology, Genetic and Biochemi...3932 days ago
Great Place to Study Bioinformatics in Europe
...//www.cs.helsinki.fi/en/mbi/ Stockholm University, Sweden http://www.sbc.su.se/masters/ Universities in Netherlands http://www.nbic.nl/education/msc-programmes/ TUM , Munich Ge...3047 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...t [equally relevant to animal and microbial systems] Sense from sequence reads:...ubMedCentral De novo assembly Velvet: algorithms for de novo short read assemb...or A tutorial at Rutgers Peteris Krumins claims to have the World's Best Int...3794 days ago
List of bioinformatics open source projects/software.
...software : .NET Bio http://blogs.msdn.com/b/msr_er/archive/2011/10/18/micros...docking tools Biochemical Algorithms Library (BALL) http://www.ba...for interoperability between systems biology software Galaxy htt...ene transfer detection, Reticulograms, Substitution models) UGENE...3772 days ago
List of In-silico Binding Site Prediction Tools
...ites including both holo and apo forms from more than 40,000 structu...d split characteristic through the RMSD measurement. Furthermore, we...in a given protein. DEPTH: http://mspc.bii.a-star.edu.sg/tankp/run...//bioinfo3d.cs.tau.ac.il/MAPPIS), aims to analyze protein–prot...3759 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...nchmark RNA-Seq alignment algorithms and also algorithms that aim to reconstruct diffe...UX SIMULATOR The Flux Simulator aims at providing a deterministic...p://research.nhgri.nih.gov/gasp/GemSIM Next generation sequencing...code.google.com/p/proteinevolver/QMSim QTL and Marker Simulator ht...3752 days ago
Linux for bioinformatician !!!
...owerful admin tools and utilities which will help you to manage your systems effectively and handle huge a...on Linux-based computers and software. Although most bioinformatics programs can be compiled to run. If yo...3720 days ago
Perl one-liner for bioinformatician !!!
...ols, etc.), there are still times where knowing a little bit of Perl onliner is extremely helpful. Perl one-liners are small and awesome Perl programs that fit in a single line of...3643 days ago
Next generation sequencing in R or bioconductor environment
...any speed and memory effective string containers, string matching algorithms, and other utilities, for fas...etrieve the sequences around peaks, obtain enriched Gene Ontology (GO) terms, find the nearest gene, exon,...3640 days ago
Commercial and public next-gen-seq (NGS) software
...y the 1001 Genomes project. Source for POSIX. SlimSearch - Fledgling commercial p...ence comparison. It contains the following programs: SWIFT — fast local ali...RNA or NCBI genome builds for a number of organisms. Web Portal. OS independent....3534 days ago