Results for "MV data analysis"
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The Genome Assembly Evalua...rting (GAEMR) package is an assembly analysis framework composed a number o...ingle program to generate a complete analysis report, or executed individua...mat to be entered into GAEMR’s analysis pipeline, hence enabling the...2895 days ago
- Blobsplorer is a tool for interactive visualization of assembled DNA sequence data ("contigs") derived from (often unintentionally) mixed-species poo...bsplorer is unlikely to be of use on its own as it requires contig data to...
2895 days ago
CNIDARIA: fast, reference-free phylogenomic clustering
Motivation: Identification of biological specimens is a major requiremen...ethods analyse unprocessed sequencing data without relying on prior know...clustering genomic and transcriptomic data with no limitation on ge-nome...plementary information: Supplementary data are...2893 days ago
- In a nutshell Anvi’o is an analysis and visualization platform for ‘omics data. Please find the methods paper here: http...nowledgements section of our methods paper An analysis and visualization platform for 'omics data http://merenlab.org/projects...
2893 days ago
- statistical analysis and visulization of functional profiles for genes and gene clustersBioconductor version: Release (3.3)This package implements methods to analyze and visua...
2893 days ago
- Horizontal gene transfer (HGT), the transfer of genetic material between organisms, is crucial for genetic innova...then compared the method to existing HGT detection tools using a larger strain data set...
2887 days ago
Linux command line exercises for NGS data processing
...tutorial is to introduce students to the frequently used tools for NGS analysis as well as giving experie...as it is a language in itself and is used more often to manipulate NGS data as compared to the other command...2887 days ago
- ...-source tool used in next-generation sequence analysis. This primer provides an...towards those new to next-generation sequence analysis. The primer is also designed...tall SAMtools, and no other tools, and sample data sets are provided. Terms in bold...
2886 days ago
- _A5-miseq_ is a pipeline for assembling DNA sequence data generated on the Illumina sequencing platform....ce accurate results, A5-miseq requires Illumina data with certain characteristics....nt assembler if a tool like FastQC reports your data qua...
2830 days ago
- ...latory elements. These interaction datasets are important resources t...ontologies, making sense of these datasets demands integrative and e...network theory approaches for the analysis of chromatin interaction...unctional genomics and interaction datasets, 3) querying network componen...
2882 days ago
