Bioinformatics algorithms tutorials
Useful bioinformatics tutorial, such as De Bruijn Graphs for NGS AssemblyAlgorithms for PacBio ReadsSoftware and Hardware Concepts for BioinformaticsFind...mbly - a Hands on PrimerIntroduction to PERL, Python, R and C/C++ for Bioi...3616 days ago
Integrative Genomics Viewer (IGV) tutorial
The Integrative Genomics Viewer (IGV) from the Broad Center allows you to view several types of data files involved in any NGS analysis that employs a reference genome,...3598 days ago
A simple tutorial for a complex ComplexHeatmap
ComplexHeatmap (Gu, Eils, and Schlesner (2016)) is an R Programming Language (R Core Team (2020)) package that is currently listed in the Bioconductor pac...1142 days ago
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HOMER: Software for motif discovery and next-gen sequencing analysis
This tutorial covers topics independently of HOMER, and represents knowledge which is important to know before diving head first into more...ression Arrays using R/Bioconductor General Tips for Data...2944 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes a...run on multi-core architectures. The run-time for aligning two bird-size genome...ly sensitive sequence alignment: Satsuma. Bioinformatics, 26(9), 1145-51. Tutorial...2927 days ago
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Linux command line exercises for NGS data processing
The purpose of this tutorial is to introduce students to the frequently used tools for NGS analysis as well as giving exp...ge directory (cd) to the linuxTutorial folder, and do all the proces...~/]$ cp -r /home/opt/MScBioinformatics/linuxTutorial . [uzi@quince-srv2 ~/]$...2887 days ago