Results for "Mammalian Genomics"
Top-level pages
Perl one-liner for bioinformatician !!!
With the emergence of NGS technologies, and se...nd wrangle around massive amounts of genomics text. There are several "stan...regexp. Reference/Sources: http://genomics-array.blogspot.in/2010/11/som...c-for-your-gene-annotations/ http://genomics-array.blogspot.com/2010/11/so...3621 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them...er BiocViews HT-Seq Data Visualization ggbio: ggplot2 extension for genomics data (online manual) Gviz:&nb...3618 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and referenc...interactive and reproducible genomics. A job webportal. Genomatix -...omosomes of model organism or mammalian genomes. Developers at Bosto...NGE - Mapping and Quantifying Mammalian Transcriptomes by RNA-Seq. S...3512 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that a...chers and academics. Visit http://voyager.completegenomics.com to signup. More @ ...rst application to create a music melody from DTC-Genomics data. If you own 23andMe (Mou...3535 days ago
- Pathway Analysis is usually performed with aim to enrich the genes with their functiona...to disclose the relationships between these genes. With availability of more genomics, transcriptomics and proteomi...
3489 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
DEPARTMENT OF BIOTECHNOLOGY Centre For DNA Fingerprinting And Diagnostics (CDFD), Hy...T - Indian Institute of Chemical Technology, Hyderabad IGIB - (Institute of genomics and Integrative Biology) IM...2564 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and refere...interactive and reproducible genomics. A job webportal. * Genomatix...omosomes of model organism or mammalian genomes. Developers at Bosto...NGE - Mapping and Quantifying Mammalian Transcriptomes by RNA-Seq. S...3236 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...SC variant database, complete genomics master var file Read mapping...TCGA databases Lasergene Genomics Suite Comprehensive NGS so...oftware product, for clinical genomics professionals, manage, curate...lso be imported from Complete Genomics (cg_process_sample command),...2902 days ago
- alignment: the mapping of a raw sequence read to a location...dled with SAMtools, for identifying and filtering genomics variants. bowtie: widely use...command line tools for identifying and filtering genomics variants. Created by Heng Li,...
2862 days ago
Genome Assembly Tools and Software - PART1 !!
...e Trinity-based Iterative Metagenomics Assembler TriMetAss is an e...anding problems in functional genomics. Rnnotator is an automated so...dles large datasets. CLC Genomics Workbench 8.5.1 – Assem...orks on both small and large (mammalian size) genomes. To use it, yo...2679 days ago
