Results for "Markov Chain Exploration"
Bio-Scripts
Perl script to run SATSUMA in loop !
#!/usr/bin/perl -w use strict; use File::Temp qw(tempfile); # Usage perl 1by1.pl for SATSUMA analysis # User need to set the reference multifasta file name here...2141 days ago
Identify genome-wide synteny with LASTZ alignment
#This is the walkstrough how to identifiy genome-wide synteny markers bas...t Step2: Alignment using LASTZ and Chain/Net lastz AAChr1.txt FFChr...0 T=1 --format=axt --out=chr01.axt axtChain -linearGap=medium chr01.axt A...t chr1.chain.filter.tnet.synnet chr01.chain.filte...518 days ago
