PEAR: a fast and accurate Illumina Paired-End reAd mergeR
...bsp;is an ultrafast, memory-efficient and highly accurate pair-end read merger. It is fully parallelized an...sitive results. Together with a highly optimized implementation, it can merge millions of paired end reads...3089 days ago
GAM-NGS: genomic assemblies merger for next generation sequencing
GAM-NGS (Genomic Assemblies Merger for Next Generation Sequencing), whose primary goal is to merge two or more assemblies in ord...2833 days ago
2832 days ago
MeGAMerge: A tool to merge assembled contigs, long reads from metagenomic sequencing runs
MeGAMerge MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs) Description MeGAMerge is a perl based wrapper/tool...2832 days ago
2766 days ago
GAM-NGS: genomic assemblies merger for next generation sequencing
GAM-NGS is a tool able to merge two or more assemblies in order to improve contiguity and correctness. It can be used on all NGS-based assembly projects and it shows its full poten...2682 days ago
2680 days ago
GffCompare: Program for processing GTF/GFF files
The program gffcompare can be used to compare, merge, annotate and estimate accuracy of one or more GFF files (the “query” files), when compared with a reference annotation (also provided as GFF).1900 days ago
3D de novo assembly (3D DNA) pipeline
...n (Dudchenko et al., Science, 2017) see the original commit. For the detailed description of the merge section see https://github.com/theaidenlab/AGWG-merge.1692 days ago
RagTag: a collection of software tools for scaffolding and improving modern genome assemblies
RagTag is a collection of software tools for scaffolding and improving modern genome assemblies. Tasks include: Homology-based misassembly correction Homology-based assembly scaffolding and patching Scaffold merging1106 days ago