Results for "Microbiome"
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Microbiome analysis using a single application MEGAN6 is a comprehensive toolbox for interactively analyzing microbiome data. All the interactive too...2833 days ago
INC-Seq: accurate single molecule reads using nanopore sequencing
INC-Seq reads enabled accurate species-level classification, identification of species at 0.1 % abundance and robust quantification of relative abundances, providing a cheap and effective approach for pathogen detection and microbiome profiling on the MinION system.2343 days ago
sunbeam: A robust, extensible metagenomics pipeline
...xisting dependencies or admin privileges, and can be deployed on most Linux workstations and clusters. To read more, check out our paper in Microbiome. https://sunbeam.readthedocs...1409 days ago
What is the hologenome concept of evolution?
...are colonized by microbes, but a gestalt study of the composition of microbiome communities and their influen...e. One approach to thinking about the topic is to view the host–microbiome ecosystem as a “holobio...1179 days ago
WAAFLE: a Workflow to Annotate Assemblies and Find LGT Events.
Lateral gene transfer (LGT) is an important mechanism for genome diversification in microbial communities, including the human microbiome. While methods exist to identify LGTs from sequ...947 days ago
