BOL

Results for "N"

Tags

• • Jit@jit.aber

  

  Remove N from a fasta file. Go to vi editor, type :%s/N\{25,\}//g and press enter. #Vim #vi #N #Replace #Fasta

  Tags: Vim, vi, N, Replace, Fasta

  3620 days ago

• • Poonam Mahapatra@poonam

  

  How to count the occurance of letters in fasta file?

  I received a new genome to annotated. I need your help to quickly count the occurance of all the letters in fasta file.

  Tags: Fasta, Count, Letters, ATGC, N, Others, Script

  2964 days ago

• • Rahul Nayak@rahul

  

  Convert masked genome to N letters. $ perl -pe '/^[^>]/ and $_=~ s/[a-z]/N/g' genomic.fna > genomic.N-masked.fna #Genome #Masked #N #Convert

  Tags: Genome, Masked, N, Convert

  2522 days ago

• • Jit@jit.aber

  

  Convert lowercase letter to N:$ sed -e '/^>/! s/[[:lower:]]/N/g' in.fasta > out.fasta #Convert #Lowercase #Fasta #N

  Tags: Convert, Lowercase, Fasta, N

  2217 days ago