Results for "NGS data analysis"
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Although centromeres are essential for life and are the subject of extensive research,...known centromere locations from high coverage Hi-C data of budding yeast and a human...tagenomic samples with relatively low coverage Hi-C data to...3005 days ago
- HiCdat: a fast and easy-to-use Hi-C data analysis tool HiCdat is easy-to-use and provides solutions starting from al...ads up to in-depth analyses. Importantly, HiCdat is focussed on the analysis of larger structural features...
3005 days ago
- This is a collection of libraries...user scripts for bioinformatic analysis, including working with gene annotation, collecting data scores from a variety of mode...formats and the collection of data from multiple data files. The...ncludes scripts for setting up databases of annotation, collecting an...
2997 days ago
- Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, su...
2992 days ago
Ensembl comparative genomics resources
...omprehensive and reproducible analysis of chordate genome data. Ensembl computes pairwise an...nformatics infrastructure and data presentation across all suppo...is extensively reused for the analysis of non-vertebrate species by...produce reference comparative data and make it freely available. Da...2988 days ago
- This software is designed to identify both simple and complex rearrangements from paired-end sequencing data. Us...
2987 days ago
- Machine Learning in Python Simple and efficient tools for data mining and data analysis Accessible to everybody, and reusable in various contexts Built on NumPy, SciPy, and matplotlib Open source, commercially usable - BSD license More at http://scikit-learn.org/stable/index.html
2987 days ago
- Ultrafast and accurate nucleotide-resolution analysis of structural variants More at http://bioinform.github.io/breakseq2/ Download BreakSeq2 Latest version: https://github.com/bioinform/b...
2987 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a gen...e Indicate the reliability of each aligned column. Use sequence quality data pro...
2978 days ago
