HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution
Software accompanying "HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution... repository. HINGE is an OLC(Overlap-Layout-Consensus) assembler. The idea of the pipeline is shown belo...2279 days ago
d3Network:Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R.
Mike Bostock’s D3.js is great for creating interactive network...nbsp;package makes it easy to create these network graphs from R. The main idea is that you should able to ta...2221 days ago
kallisto: a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data
kallisto is a program for quantifying abundances of transcripts from bulk and...rget sequences using high-throughput sequencing reads. It is based on the novel idea of pseudoalignment ...1945 days ago
Shouji: a fast and efficient pre-alignment filter for sequence alignment
The ability to generate massive amounts of sequencing da...costly dynamic programming algorithms. The first key idea of our proposed pre-alignment...s shared between two given sequences. The second key idea is to design a hardware accel...1644 days ago
972 days ago