BOL: HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution

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HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution

HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution

By Jit 2481 days ago

https://github.com/HingeAssembler/HINGE

Software accompanying "HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution"

Preprint: http://biorxiv.org/content/early/2016/08/01/062117
Paper: http://genome.cshlp.org/content/27/5/747.full
An ipython notebook to reproduce results in the paper can be found in this repository.

HINGE is an OLC(Overlap-Layout-Consensus) assembler. The idea of the pipeline is shown below.